Stem-loop tcf-mir-745

Accession

MI0033241

Description

Triops cancriformis tcf-mir-745 precursor miRNA

Sequence

1663 reads, 77.0 reads per million, 6 experiments

CAGUCCUUUCCCGGGCACUAGCUUcugguaucgaaaGAGCUGCCCAGUGAAGGGCUUUC
.((((((((.(.(((((...(((.((.........)))))))))).).))))))))...

Structure

--C        C C     CUA   U  ggu 
   AGUCCUUU C GGGCA   GCU cu   a
   |||||||| | |||||   ||| ||   u
   UCGGGAAG G CCCGU   CGA Ga   c
CUU        U A     ---   -  aag 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-745-5p

• Accession: MIMAT0059228
• Description: Triops cancriformis tcf-miR-745-5p mature miRNA
• Sequence: 1 - CAGUCCUUUCCCGGGCACUAGCUU - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-745-3p

• Accession: MIMAT0041408
• Description: Triops cancriformis tcf-miR-745-3p mature miRNA
• Sequence: 37 - GAGCUGCCCAGUGAAGGGCUUUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242