Stem-loop tcf-mir-750

Accession

MI0033242

Description

Triops cancriformis tcf-mir-750 precursor miRNA

Sequence

88155 reads, 4269.0 reads per million, 6 experiments

AGUUGGAAGUGGGGAUCUAGGCAccugcaacuugcucacaauuucgcaaagcuuuccuucaacucguugcugaaagagcuuugcugaaaucgugCCAGAUCUAUCUCUUCCAGCUCA
(((((((((.((((((((.(((((..(((...))).....(((((((((((((((..((((.(.....).)))))))))))))).))))).))))))))))).)).)))))))))..

Structure

--         U  -      A     cugcaacuugcucaca     -          cc    a u 
  AGUUGGAAG GG GGAUCU GGCAc                auuuc gcaaagcuuu  uuca c c
  ||||||||| || |||||| |||||                ||||| ||||||||||  |||| | g
  UCGACCUUC CU UCUAGA CCgug                uaaag cguuucgaga  aagu g u
AC         U  A      -     ---------------c     u          --    c u 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-750-5p

• Accession: MIMAT0059229
• Description: Triops cancriformis tcf-miR-750-5p mature miRNA
• Sequence: 1 - AGUUGGAAGUGGGGAUCUAGGCA - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-750-3p

• Accession: MIMAT0041409
• Description: Triops cancriformis tcf-miR-750-3p mature miRNA
• Sequence: 95 - CCAGAUCUAUCUCUUCCAGCUCA - 117
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242