Stem-loop tcf-mir-965

Accession

MI0033243

Description

Triops cancriformis tcf-mir-965 precursor miRNA

Sequence

9485 reads, 468.0 reads per million, 6 experiments

AGGGAAAAGCUGUGACGAUUGUGcgaaucuaagaauugcaUAAGCGUAUGGCUUUUCCCCUG
.(((((((((((((.((.((((((((.((...)).)))))))).)))))))))))))))...

Structure

--A             A  A        a  u 
   GGGAAAAGCUGUG CG UUGUGcga uc  
   ||||||||||||| || |||||||| || a
   CCCUUUUCGGUAU GC AAUacguu ag  
GUC             -  G        a  a 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-965-5p

• Accession: MIMAT0059230
• Description: Triops cancriformis tcf-miR-965-5p mature miRNA
• Sequence: 1 - AGGGAAAAGCUGUGACGAUUGUG - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-965-3p

• Accession: MIMAT0041410
• Description: Triops cancriformis tcf-miR-965-3p mature miRNA
• Sequence: 41 - UAAGCGUAUGGCUUUUCCCCUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242