Stem-loop tcf-mir-981

Accession

MI0033244

Description

Triops cancriformis tcf-mir-981 precursor miRNA

Sequence

21874 reads, 976.0 reads per million, 6 experiments

UCGGGUUUCGCGAUAUUCGAACUgugcuucccggagccuauugcuaccgagUUCGUUGUCGACGAAACCUGCAC
.((((((((((((((..((((((........((((((.....))).))))))))).))))).)))))))))...

Structure

--U         -     UU      gugcuucc   -   c 
   CGGGUUUCG CGAUA  CGAACU        cgg agc u
   ||||||||| |||||  ||||||        ||| ||| a
   GUCCAAAGC GCUGU  GCUUga        gcc ucg u
CAC         A     -U      --------   a   u 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-981-5p

• Accession: MIMAT0059231
• Description: Triops cancriformis tcf-miR-981-5p mature miRNA
• Sequence: 1 - UCGGGUUUCGCGAUAUUCGAACU - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-981-3p

• Accession: MIMAT0041411
• Description: Triops cancriformis tcf-miR-981-3p mature miRNA
• Sequence: 52 - UUCGUUGUCGACGAAACCUGCAC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242