Stem-loop tcf-mir-995

Accession

MI0033246

Description

Triops cancriformis tcf-mir-995 precursor miRNA

Sequence

847 reads, 43.0 reads per million, 6 experiments

ACUGAAUCUUGCGGUGGGUACCagcuucgcacggccguacuguacuguacaucaagcuugcuuuccgacucaaggUAGCACCACAGGAUUCAGCUU
.((((((((((.((((..((((....(((...(((.((((......)))).........)))...))).....)))).)))).))))))))))...

Structure

--A          C    GG    -agcu   cac   --------c    ug 
   CUGAAUCUUG GGUG  UACC     ucg   ggc         guac  u
   |||||||||| ||||  ||||     |||   |||         ||||   
   GACUUAGGAC CCAC  AUgg     agc   ucg         caug  a
UUC          A    -G    aacuc   cuu   uucgaacua    uc 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-995-5p

• Accession: MIMAT0059232
• Description: Triops cancriformis tcf-miR-995-5p mature miRNA
• Sequence: 1 - ACUGAAUCUUGCGGUGGGUACC - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-995-3p

• Accession: MIMAT0041414
• Description: Triops cancriformis tcf-miR-995-3p mature miRNA
• Sequence: 76 - UAGCACCACAGGAUUCAGCUU - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242