Stem-loop tcf-mir-996

Accession

MI0033247

Description

Triops cancriformis tcf-mir-996 precursor miRNA

Sequence

6966 reads, 320.0 reads per million, 6 experiments

GAUGGGUGUUGCUUUGGUGCAUGugauacuauacucuccaUGACUAGAGUUACACUCAUCU
(((((((((.((((((((.((((.((..........)))))))))))))).))))))))).

Structure

-         U        G    u  uacu 
 GAUGGGUGU GCUUUGGU CAUG ga    a
 ||||||||| |||||||| |||| ||     
 CUACUCACA UGAGAUCA GUac cu    u
U         U        -    -  cuca 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-996-5p

• Accession: MIMAT0059233
• Description: Triops cancriformis tcf-miR-996-5p mature miRNA
• Sequence: 1 - GAUGGGUGUUGCUUUGGUGCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-996-3p

• Accession: MIMAT0041415
• Description: Triops cancriformis tcf-miR-996-3p mature miRNA
• Sequence: 41 - UGACUAGAGUUACACUCAUCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242