Stem-loop tcf-mir-2944a

Accession

MI0033251

Description

Triops cancriformis tcf-mir-2944a precursor miRNA

Sequence

75207 reads, 4219.0 reads per million, 6 experiments

AAGGAACUACCGCUGUGGUAUGuggagccuuccgUAUCACAGCCGUAGUUACCUAGA
.(((((((((.(((((((((((.(((...)))))))))))))).)))))).)))...

Structure

--A   -      C           u   g 
   AGG AACUAC GCUGUGGUAUG gga  
   ||| |||||| ||||||||||| ||| c
   UCC UUGAUG CGACACUAUgc cuu  
AGA   A      C           -   c 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-2944a-5p

• Accession: MIMAT0059236
• Description: Triops cancriformis tcf-miR-2944a-5p mature miRNA
• Sequence: 1 - AAGGAACUACCGCUGUGGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-2944a-3p

• Accession: MIMAT0041420
• Description: Triops cancriformis tcf-miR-2944a-3p mature miRNA
• Sequence: 35 - UAUCACAGCCGUAGUUACCUAGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242