Stem-loop tcf-mir-3477

Accession

MI0033252

Description

Triops cancriformis tcf-mir-3477 precursor miRNA

Sequence

121185 reads, 6056.0 reads per million, 6 experiments

UAAUCUCAUGCGGUAACUCUGAGAgaguguaugucucUCGGAGUGUCACGUGAGAUAUG
..((((((((.((..(((((((((((.......))))))))))).)).))))))))...

Structure

-UA        C  UA           gu 
   AUCUCAUG GG  ACUCUGAGAga  g
   |||||||| ||  |||||||||||  u
   UAGAGUGC CU  UGAGGCUcucu  a
GUA        A  -G           gu 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-3477-5p

• Accession: MIMAT0041421
• Description: Triops cancriformis tcf-miR-3477-5p mature miRNA
• Sequence: 1 - UAAUCUCAUGCGGUAACUCUGAGA - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-3477-3p

• Accession: MIMAT0059237
• Description: Triops cancriformis tcf-miR-3477-3p mature miRNA
• Sequence: 38 - UCGGAGUGUCACGUGAGAUAUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242