Stem-loop tcf-mir-3791

Accession

MI0033253

Description

Triops cancriformis tcf-mir-3791 precursor miRNA

Sequence

2219649 reads, 139345.0 reads per million, 6 experiments

CGGUGAAUUUUGCUAUCGGUGAUGuuaacgucgguuuuucaUCACCGGGUAGAAUUCAUCCAG
.(((((((((((((..((((((((..(((....)))...)))))))))))))))))))))...

Structure

--C             AU        -uu   g 
   GGUGAAUUUUGCU  CGGUGAUG   aac u
   |||||||||||||  ||||||||   |||  
   CUACUUAAGAUGG  GCCACUac   uug c
GAC             --        uuu   g 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-3791-5p

• Accession: MIMAT0059238
• Description: Triops cancriformis tcf-miR-3791-5p mature miRNA
• Sequence: 1 - CGGUGAAUUUUGCUAUCGGUGAUG - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-3791-3p

• Accession: MIMAT0041422
• Description: Triops cancriformis tcf-miR-3791-3p mature miRNA
• Sequence: 42 - UCACCGGGUAGAAUUCAUCCAG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242