Stem-loop tcf-mir-iab-4

Accession

MI0033254

Description

Triops cancriformis tcf-mir-iab-4 precursor miRNA

Sequence

4236 reads, 205.0 reads per million, 6 experiments

ACGUAUACUGAAUGUAUCCUGAgcauauacauUCCGGUAUACCUUCAGUAUACGUAac
((((((((((((.((((((.(((........))).)).)))).))))))))))))...

Structure

---            U    -  U   cau 
   ACGUAUACUGAA GUAU CC GAg   a
   |||||||||||| |||| || |||    
   UGCAUAUGACUU CAUA GG CUu   u
caA            C    U  C   aca 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-iab-4-5p

• Accession: MIMAT0041423
• Description: Triops cancriformis tcf-miR-iab-4-5p mature miRNA
• Sequence: 1 - ACGUAUACUGAAUGUAUCCUGA - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-iab-4-3p

• Accession: MIMAT0059239
• Description: Triops cancriformis tcf-miR-iab-4-3p mature miRNA
• Sequence: 33 - UCCGGUAUACCUUCAGUAUACGUA - 56
• Evidence: experimental ; unknown

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242