Stem-loop tcf-mir-iab-8

Accession

MI0033255

Description

Triops cancriformis tcf-mir-iab-8 precursor miRNA

Sequence

1721 reads, 67.0 reads per million, 6 experiments

UACGUAUACUGAAGGUAUACCGGAauguauaugcUCAGGAUACAUUCAGUAUACGUcc
.((((((((((((.((((.((.((..........)).)))))).))))))))))))..

Structure

-U            G    A  G  augu 
  ACGUAUACUGAA GUAU CC GA    a
  |||||||||||| |||| || ||     
  UGCAUAUGACUU CAUA GG CU    u
cc            A    -  A  cgua 

Annotation confidence Medium

Genome context

Unknown

Mature tcf-miR-iab-8-5p

• Accession: MIMAT0041424
• Description: Triops cancriformis tcf-miR-iab-8-5p mature miRNA
• Sequence: 1 - UACGUAUACUGAAGGUAUACCGGA - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-iab-8-3p

• Accession: MIMAT0059240
• Description: Triops cancriformis tcf-miR-iab-8-3p mature miRNA
• Sequence: 35 - UCAGGAUACAUUCAGUAUACGU - 56
• Evidence: experimental ; unknown

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242