Stem-loop tcf-mir-10294

Accession

MI0033256

Description

Triops cancriformis tcf-mir-10294 precursor miRNA

Sequence

241514 reads, 11884.0 reads per million, 6 experiments

CUGUUGAUCAUUUGGCCAAUCCUgcuuacucgugaaagcACUUGGUUAUAUGAUUGACAGCU
(((((((((((.(((((((...(((((.(....).))))).))))))).)))))))))))..

Structure

--           U       UCC     a u 
  CUGUUGAUCAU UGGCCAA   Ugcuu c c
  ||||||||||| |||||||   ||||| |  
  GACAGUUAGUA AUUGGUU   Acgaa g g
UC           U       --C     a u 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10294-5p

• Accession: MIMAT0059241
• Description: Triops cancriformis tcf-miR-10294-5p mature miRNA
• Sequence: 1 - CUGUUGAUCAUUUGGCCAAUCCU - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10294-3p

• Accession: MIMAT0041425
• Description: Triops cancriformis tcf-miR-10294-3p mature miRNA
• Sequence: 40 - ACUUGGUUAUAUGAUUGACAGCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242