Stem-loop tcf-mir-10295

Accession

MI0033257

Description

Triops cancriformis tcf-mir-10295 precursor miRNA

Sequence

44853 reads, 2798.0 reads per million, 6 experiments

GGAUGGACAACACUUCGGUUGGCAguuccuguugauugUCACUGGGUGCGGUUCAUCCUG
((((((((..((((.((((.(((((((......)))))))))))))))..))))))))..

Structure

--        AA    U    U       cc 
  GGAUGGAC  CACU CGGU GGCAguu  u
  ||||||||  |||| |||| |||||||   
  CCUACUUG  GUGG GUCA CUguuag  g
GU        GC    -    -       uu 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10295-5p

• Accession: MIMAT0059242
• Description: Triops cancriformis tcf-miR-10295-5p mature miRNA
• Sequence: 1 - GGAUGGACAACACUUCGGUUGGCA - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10295-3p

• Accession: MIMAT0041426
• Description: Triops cancriformis tcf-miR-10295-3p mature miRNA
• Sequence: 39 - UCACUGGGUGCGGUUCAUCCUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242