Stem-loop tcf-mir-10296

Accession

MI0033258

Description

Triops cancriformis tcf-mir-10296 precursor miRNA

Sequence

92175 reads, 5183.0 reads per million, 6 experiments

gcUUCGAAUCUAUGGUUGCAAUGCugacuugcuucaUUGCACUGUAUGGUUCGAGGCGA
((((((((((((((((.((((((..(.....)..)))))))))))).))))))))))..

Structure

--          -      U      Cu a 
  gcUUCGAAUC UAUGGU GCAAUG  g c
  |||||||||| |||||| ||||||  | u
  CGGAGCUUGG AUGUCA CGUUac  c u
AG          U      -      uu g 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10296-5p

• Accession: MIMAT0059243
• Description: Triops cancriformis tcf-miR-10296-5p mature miRNA
• Sequence: 3 - UUCGAAUCUAUGGUUGCAAUGC - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10296-3p

• Accession: MIMAT0041427
• Description: Triops cancriformis tcf-miR-10296-3p mature miRNA
• Sequence: 37 - UUGCACUGUAUGGUUCGAGGCGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242