Stem-loop tcf-mir-10297

Accession

MI0033259

Description

Triops cancriformis tcf-mir-10297 precursor miRNA

Sequence

84338 reads, 5335.0 reads per million, 6 experiments

CCCUAUUACUUGUUGGCUCAACauuacgucaugUUGCACUAACCGGUAGUGGGCUU
.(((((((((.(((((..((((((......))))))..))))).)))))))))...

Structure

--C         U     CU      ua 
   CCUAUUACU GUUGG  CAACau  c
   ||||||||| |||||  ||||||   
   GGGUGAUGG CAAUC  GUUgua  g
UUC         C     AC      cu 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10297-5p

• Accession: MIMAT0059244
• Description: Triops cancriformis tcf-miR-10297-5p mature miRNA
• Sequence: 1 - CCCUAUUACUUGUUGGCUCAAC - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10297-3p

• Accession: MIMAT0041428
• Description: Triops cancriformis tcf-miR-10297-3p mature miRNA
• Sequence: 34 - UUGCACUAACCGGUAGUGGGCUU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242