miRBase entry: tcf-mir-10298a

Stem-loop tcf-mir-10298a


Accession
MI0033260
Description
Triops cancriformis tcf-mir-10298a precursor miRNA


Sequence

15552 reads, 734.0 reads per million, 6 experiments
UUGGUUUGAGAUGAGUGGACCCGuaaauguaauaucCGGGUCCACUUAUCUCAAACaau
...((((((((((((((((((((.............))))))))))))))))))))...

Structure
UUG                    uaaau 
   GUUUGAGAUGAGUGGACCCG     g
   ||||||||||||||||||||     u
   CAAACUCUAUUCACCUGGGC     a
uaa                    cuaua 


Annotation confidence Medium
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcf-miR-10298a-5p

Accession MIMAT0041429
Description Triops cancriformis tcf-miR-10298a-5p mature miRNA
Sequence 1 - UUGGUUUGAGAUGAGUGGACCCG - 23
Evidence experimental
Illumina [1]

Mature tcf-miR-10298a-3p

Accession MIMAT0059245
Description Triops cancriformis tcf-miR-10298a-3p mature miRNA
Sequence 37 - CGGGUCCACUUAUCUCAAAC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25525151
    Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
    "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
    "RNA (2015) 21:230-242