Stem-loop tcf-mir-10299

Accession

MI0033261

Description

Triops cancriformis tcf-mir-10299 precursor miRNA

Sequence

12186 reads, 575.0 reads per million, 6 experiments

AUCGGCACUGGGUAACAAUGAAuguuccacuauggaaauauuaauaucAUUGUUAUCCAGUGCCGUGUA
..(((((((((((((((((((((((((((...))).))))).....)))))))))))))))))))....

Structure

--AU                   -----     -   c 
    CGGCACUGGGUAACAAUGA     Auguu cca  
    |||||||||||||||||||     ||||| ||| u
    GCCGUGACCUAUUGUUAcu     uauaa ggu  
AUGU                   auaau     a   a 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10299-5p

• Accession: MIMAT0041430
• Description: Triops cancriformis tcf-miR-10299-5p mature miRNA
• Sequence: 1 - AUCGGCACUGGGUAACAAUGAA - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10299-3p

• Accession: MIMAT0059246
• Description: Triops cancriformis tcf-miR-10299-3p mature miRNA
• Sequence: 49 - AUUGUUAUCCAGUGCCGUGUA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242