Stem-loop tcf-mir-10300

Accession

MI0033262

Description

Triops cancriformis tcf-mir-10300 precursor miRNA

Sequence

11305 reads, 606.0 reads per million, 5 experiments

UGUGAUGUGUUAUUUCAAACUAGUgugcuuuuaugcauucacUAGUUAAAUAGCACAUCAUUAG
.((((((((((((((..(((((((((((......)))..))))))))))))))))))))))...

Structure

--U              CA        --   uu 
   GUGAUGUGUUAUUU  AACUAGUg  ugc  u
   ||||||||||||||  ||||||||  |||   
   UACUACACGAUAAA  UUGAUcac  acg  u
GAU              --        uu   ua 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10300-5p

• Accession: MIMAT0041431
• Description: Triops cancriformis tcf-miR-10300-5p mature miRNA
• Sequence: 1 - UGUGAUGUGUUAUUUCAAACUAGU - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10300-3p

• Accession: MIMAT0059247
• Description: Triops cancriformis tcf-miR-10300-3p mature miRNA
• Sequence: 43 - UAGUUAAAUAGCACAUCAUUAG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242