Stem-loop tcf-mir-316

Accession

MI0033267

Description

Triops cancriformis tcf-mir-316 precursor miRNA

Sequence

3845 reads, 168.0 reads per million, 6 experiments

UGUCUUUUCCGCUUGACUGCCGagcaagggccgaugaucaaguugaaaccccgGCAAUCUAGAGGAAGAGACAGA
((((((((((.((.((.(((((.....(((.((((......))))...)))))))).)).)).))))))))))..

Structure

--          G  U  C     agcaa   --c    ga 
  UGUCUUUUCC CU GA UGCCG     ggg   cgau  u
  |||||||||| || || |||||     |||   ||||   
  ACAGAGAAGG GA CU ACGgc     ccc   guug  c
AG          A  U  A     -----   aaa    aa 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-316-5p

• Accession: MIMAT0041436
• Description: Triops cancriformis tcf-miR-316-5p mature miRNA
• Sequence: 1 - UGUCUUUUCCGCUUGACUGCCG - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-316-3p

• Accession: MIMAT0059250
• Description: Triops cancriformis tcf-miR-316-3p mature miRNA
• Sequence: 54 - GCAAUCUAGAGGAAGAGACAGA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242