Stem-loop tcf-mir-10304

Accession

MI0033268

Description

Triops cancriformis tcf-mir-10304 precursor miRNA

Sequence

15476 reads, 794.0 reads per million, 6 experiments

AGGAGUGGCACUUUUUGAAAUACGGgagcgugauugucgugauggaucuacaacaaucauugcucccGUAGAAGUUUUCGCCACCCCUGAA
(((.((((((((((......(((((((((((((((((.(((.......))).))))))).)))))))))))))))....))))).)))...

Structure

---   A     ----     UUGAAA          -       c   au 
   AGG GUGGC    ACUUU      UACGGgagcg ugauugu gug  g
   ||| |||||    |||||      |||||||||| ||||||| |||  g
   UCC CACCG    UGAAG      AUGcccucgu acuaaca cau  a
AAG   C     CUUU     ------          u       a   cu 

Annotation confidence Medium

Genome context

Unknown

Mature tcf-miR-10304-5p

• Accession: MIMAT0059251
• Description: Triops cancriformis tcf-miR-10304-5p mature miRNA
• Sequence: 1 - AGGAGUGGCACUUUUUGAAAUACGG - 25
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10304-3p

• Accession: MIMAT0041437
• Description: Triops cancriformis tcf-miR-10304-3p mature miRNA
• Sequence: 68 - GUAGAAGUUUUCGCCACCCCUGAA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242