Stem-loop tcf-mir-79

Accession

MI0033270

Description

Triops cancriformis tcf-mir-79 precursor miRNA

Sequence

3766 reads, 218.0 reads per million, 6 experiments

UUGGUGGUUUCGCUUUCUGGAagauuuuuugguauuucCUAAAGCUAAGCCACCAGAGGG
((((((((((.(((((..((((((((....))).))))).))))).))))))))))....

Structure

----          C     CU     -   u 
    UUGGUGGUUU GCUUU  GGAag auu u
    |||||||||| |||||  ||||| |||  
    GACCACCGAA CGAAA  Ccuuu ugg u
GGGA          U     -U     a   u 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-79-5p

• Accession: MIMAT0059253
• Description: Triops cancriformis tcf-miR-79-5p mature miRNA
• Sequence: 1 - UUGGUGGUUUCGCUUUCUGGA - 21
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-79-3p

• Accession: MIMAT0041439
• Description: Triops cancriformis tcf-miR-79-3p mature miRNA
• Sequence: 39 - CUAAAGCUAAGCCACCAGAGGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242