Stem-loop tcf-mir-309

Accession

MI0033271

Description

Triops cancriformis tcf-mir-309 precursor miRNA

Sequence

2624 reads, 163.0 reads per million, 6 experiments

GGUAGACUAGGCUCAGUUUGACUguuuuccaagugcagUCACUGGGUGUGGUUUAUCCG
(((((((((.(((((((..((((((.........))))))))))))).)))))))))..

Structure

--         G       UU      uuu 
  GGUAGACUA GCUCAGU  GACUgu   c
  ||||||||| |||||||  ||||||   c
  CUAUUUGGU UGGGUCA  CUgacg   a
GC         G       --      uga 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-309-5p

• Accession: MIMAT0059254
• Description: Triops cancriformis tcf-miR-309-5p mature miRNA
• Sequence: 1 - GGUAGACUAGGCUCAGUUUGACU - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-309-3p

• Accession: MIMAT0041440
• Description: Triops cancriformis tcf-miR-309-3p mature miRNA
• Sequence: 39 - UCACUGGGUGUGGUUUAUCCG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242