Stem-loop tcf-mir-318

Accession

MI0033272

Description

Triops cancriformis tcf-mir-318 precursor miRNA

Sequence

1062 reads, 64.0 reads per million, 6 experiments

GGGAGAACCCUACCUUAGUGGAUGgagccuauuuaguaacaUCACUGGGUAAGGUUCGCCCCCG
(((.(((((.(((((.((((.(((..((.......))..)))))))))))).))))).)))...

Structure

---   A     C     U    G   ga  cu 
   GGG GAACC UACCU AGUG AUG  gc  a
   ||| ||||| ||||| |||| |||  ||  u
   CCC CUUGG AUGGG UCAC Uac  ug  u
GCC   G     A     -    -   aa  au 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-318-5p

• Accession: MIMAT0059255
• Description: Triops cancriformis tcf-miR-318-5p mature miRNA
• Sequence: 1 - GGGAGAACCCUACCUUAGUGGAUG - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-318-3p

• Accession: MIMAT0041441
• Description: Triops cancriformis tcf-miR-318-3p mature miRNA
• Sequence: 42 - UCACUGGGUAAGGUUCGCCCCCG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242