Stem-loop tcf-mir-10306

Accession

MI0033273

Description

Triops cancriformis tcf-mir-10306 precursor miRNA

Sequence

2186 reads, 132.0 reads per million, 6 experiments

UAAGCAGCAUCGGGCUUGGUGACCuuggaugggUGAGCACCAGGAAAGCUGUCGGCU
...(((((......(((((((((((.....))))...)))))))...))))).....

Structure

--UAA     AUCGGG       ---    u 
     GCAGC      CUUGGUG   ACCu g
     |||||      |||||||   |||| g
     UGUCG      GGACCAC   Uggg a
UCGGC     ---AAA       GAG    u 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10306-5p

• Accession: MIMAT0041442
• Description: Triops cancriformis tcf-miR-10306-5p mature miRNA
• Sequence: 1 - UAAGCAGCAUCGGGCUUGGUGACC - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10306-3p

• Accession: MIMAT0059256
• Description: Triops cancriformis tcf-miR-10306-3p mature miRNA
• Sequence: 34 - UGAGCACCAGGAAAGCUGUCGGCU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242