Stem-loop tcf-mir-10402

Accession

MI0033275

Description

Triops cancriformis tcf-mir-10402 precursor miRNA

Sequence

942 reads, 42.0 reads per million, 6 experiments

UUCGUGAAUUUUAGCAUAAUGUcguaacugaggaacuuaucuauuauuccucuuacaaggauaUUAUGCUAAAUUUCAUGAGAUU
((((((((.((((((((((((((.(....((((((...........)))))).....).)))))))))))))).))))))))...

Structure

---        U              g -aacu      cuua 
   UUCGUGAA UUUAGCAUAAUGUc u     gaggaa    u
   |||||||| |||||||||||||| |     ||||||    c
   GAGUACUU AAAUCGUAUUauag a     cuccuu    u
UUA        U              g acauu      auua 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10402-5p

• Accession: MIMAT0041444
• Description: Triops cancriformis tcf-miR-10402-5p mature miRNA
• Sequence: 1 - UUCGUGAAUUUUAGCAUAAUGU - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10402-3p

• Accession: MIMAT0059257
• Description: Triops cancriformis tcf-miR-10402-3p mature miRNA
• Sequence: 64 - UUAUGCUAAAUUUCAUGAGAUU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242