Stem-loop tcf-mir-10403

Accession

MI0033276

Description

Triops cancriformis tcf-mir-10403 precursor miRNA

Sequence

2738 reads, 165.0 reads per million, 6 experiments

GGAUGGACUUGCCUUGGUUAUauaaugucuagguaUCACCAGGUGAGAUUCAUCCAU
((((((((((((((.(((.((((.........)))).)))))))))).)))))))..

Structure

--       -       U   U    aau 
  GGAUGGA CUUGCCU GGU AUau   g
  ||||||| ||||||| ||| ||||   u
  CCUACUU GAGUGGA CCA Uaug   c
UA       A       -   C    gau 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10403-5p

• Accession: MIMAT0059258
• Description: Triops cancriformis tcf-miR-10403-5p mature miRNA
• Sequence: 1 - GGAUGGACUUGCCUUGGUUAU - 21
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10403-3p

• Accession: MIMAT0041445
• Description: Triops cancriformis tcf-miR-10403-3p mature miRNA
• Sequence: 36 - UCACCAGGUGAGAUUCAUCCAU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242