miRBase entry: tcf-mir-10309

Stem-loop tcf-mir-10309


Accession
MI0033278
Description
Triops cancriformis tcf-mir-10309 precursor miRNA


Sequence

8829 reads, 490.0 reads per million, 6 experiments
AAGAAACGAAUCGGCGCUGAGACUagucacagUUUCCAGAUGCACGGCUCGACUAG
......(((.((((((((((((((......))))).))).))).))).))).....

Structure
AAGAAA   A   -   -   -     ag 
      CGA UCG GCG CUG AGACU  u
      ||| ||| ||| ||| |||||   
      GCU GGC CGU GAC UUUga  c
-GAUCA   C   A   A   C     ca 


Annotation confidence Medium
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcf-miR-10309-5p

Accession MIMAT0041447
Description Triops cancriformis tcf-miR-10309-5p mature miRNA
Sequence 1 - AAGAAACGAAUCGGCGCUGAGACU - 24
Evidence experimental
Illumina [1]

Mature tcf-miR-10309-3p

Accession MIMAT0059259
Description Triops cancriformis tcf-miR-10309-3p mature miRNA
Sequence 33 - UUUCCAGAUGCACGGCUCGACUAG - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25525151
    Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
    "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
    "RNA (2015) 21:230-242