Stem-loop tcf-mir-10311

Accession

MI0033281

Description

Triops cancriformis tcf-mir-10311 precursor miRNA

Sequence

507 reads, 29.0 reads per million, 6 experiments

CUACAUAGGUUGAUCUCACCGgguaucaaaauaucgaacgGCGGAAUAAACCUAUGUAACU
.((((((((((..((.(.((((((((....)))))...))).)))...))))))))))...

Structure

--C          -GA  U A   ---     c 
   UACAUAGGUU   UC C CCG   gguau a
   ||||||||||   || | |||   |||||  
   AUGUAUCCAA   AG G Ggc   cuaua a
UCA          AUA  - C   aag     a 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10311-5p

• Accession: MIMAT0041449
• Description: Triops cancriformis tcf-miR-10311-5p mature miRNA
• Sequence: 1 - CUACAUAGGUUGAUCUCACCG - 21
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10311-3p

• Accession: MIMAT0059260
• Description: Triops cancriformis tcf-miR-10311-3p mature miRNA
• Sequence: 41 - GCGGAAUAAACCUAUGUAACU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242