Stem-loop tcf-mir-10313

Accession

MI0033283

Description

Triops cancriformis tcf-mir-10313 precursor miRNA

Sequence

270 reads, 17.0 reads per million, 6 experiments

CCCUUAGUCCUUCUAGUGCAAUGugguuacuucgauucaUUGCACUGGCCGGUCCAGGGUU
((((..(.((..(((((((((((.((((.....)))))))))))))))..)).).))))..

Structure

--    UA U  UU           u    a 
  CCCU  G CC  CUAGUGCAAUG gguu c
  ||||  | ||  ||||||||||| |||| u
  GGGA  C GG  GGUCACGUUac uuag u
UU    -C U  CC           -    c 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10313-5p

• Accession: MIMAT0059261
• Description: Triops cancriformis tcf-miR-10313-5p mature miRNA
• Sequence: 1 - CCCUUAGUCCUUCUAGUGCAAUG - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10313-3p

• Accession: MIMAT0041451
• Description: Triops cancriformis tcf-miR-10313-3p mature miRNA
• Sequence: 40 - UUGCACUGGCCGGUCCAGGGUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242