Stem-loop tcf-mir-10316a

Accession

MI0033287

Description

Triops cancriformis tcf-mir-10316a precursor miRNA

Sequence

2230 reads, 128.0 reads per million, 6 experiments

UCUGAGAACGGUUCGACUCGACUcgccuuaaccauagugacucggcucgacuccacguaaccuuaugaguCGACUCGAACCGUUCUCAGCCCU
.(((((((((((((((.((((((((...........((((.(((...))).).))).........)))))))).)))))))))))))))....

Structure

---U               C        ccuuaaccaua   - c   g 
    CUGAGAACGGUUCGA UCGACUcg           gug a ucg  
    ||||||||||||||| ||||||||           ||| | ||| c
    GACUCUUGCCAAGCU AGCugagu           cac u agc  
UCCC               C        --auuccaaug   c c   u 

Annotation confidence Medium

Genome context

Unknown

Mature tcf-miR-10316a-5p

• Accession: MIMAT0041455
• Description: Triops cancriformis tcf-miR-10316a-5p mature miRNA
• Sequence: 1 - UCUGAGAACGGUUCGACUCGACU - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10316a-3p

• Accession: MIMAT0059262
• Description: Triops cancriformis tcf-miR-10316a-3p mature miRNA
• Sequence: 71 - CGACUCGAACCGUUCUCAGCCCU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242