Stem-loop tcf-mir-10320

Accession

MI0033292

Description

Triops cancriformis tcf-mir-10320 precursor miRNA

Sequence

222 reads, 13.0 reads per million, 5 experiments

UGUGUCUUGUCGUGCUGCUGCUuauacauguaaugCAGACAGCAGAAAAAGGUACAGA
((((((((....(((((((((((((....)))).)))).)))))....))))))))..

Structure

--        GUCG     -    -    a 
  UGUGUCUU    UGCUG CUGC Uuau c
  ||||||||    ||||| |||| ||||  
  ACAUGGAA    ACGAC GACg aaug a
AG        AAAG     A    u    u 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10320-5p

• Accession: MIMAT0041460
• Description: Triops cancriformis tcf-miR-10320-5p mature miRNA
• Sequence: 1 - UGUGUCUUGUCGUGCUGCUGCU - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10320-3p

• Accession: MIMAT0059263
• Description: Triops cancriformis tcf-miR-10320-3p mature miRNA
• Sequence: 36 - CAGACAGCAGAAAAAGGUACAGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242