Stem-loop tcf-mir-10324

Accession

MI0033296

Description

Triops cancriformis tcf-mir-10324 precursor miRNA

Sequence

2019 reads, 112.0 reads per million, 6 experiments

UAAGAACGAGAGCAACUCAGAACCccuccggggugaugaugauagcuccggauugugccaguUCUGAGUUUCUCGUUCAUUGGCA
...((((((((..(((((((((((..((((((((.((....)).))))))))..).....)))))))))))))))))).......

Structure

----UAA        GC          ----- cc        g  g 
       GAACGAGA  AACUCAGAAC     C  uccggggu au a
       ||||||||  ||||||||||     |  |||||||| ||  
       CUUGCUCU  UUGAGUCUug     g  aggccucg ua u
ACGGUUA        --          accgu uu        a  g 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10324-5p

• Accession: MIMAT0041464
• Description: Triops cancriformis tcf-miR-10324-5p mature miRNA
• Sequence: 1 - UAAGAACGAGAGCAACUCAGAACC - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10324-3p

• Accession: MIMAT0059266
• Description: Triops cancriformis tcf-miR-10324-3p mature miRNA
• Sequence: 63 - UCUGAGUUUCUCGUUCAUUGGCA - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242