Stem-loop tcf-mir-10325

Accession

MI0033297

Description

Triops cancriformis tcf-mir-10325 precursor miRNA

Sequence

2765 reads, 155.0 reads per million, 6 experiments

UAUCUAGCAAUCCUGAUGAUGUCGCaaucgugggaaagauuugguccacuaaauuucccccacccaUAUCAUCGUCUUCUAUGGAUGGCU
.....(((.(((((((((((((.(.....(((((..((((((((....))))))))..)))))).)))))))))........)))).)))

Structure

UAUCU   A    --------         C Caauc     aa        u 
     AGC AUCC        UGAUGAUGU G     guggg  agauuugg c
     ||| ||||        ||||||||| |     |||||  ||||||||  
     UCG UAGG        GCUACUAUa c     caccc  uuuaaauc c
-----   G    UAUCUUCU         c -----     cc        a 

Annotation confidence Medium

Genome context

Unknown

Mature tcf-miR-10325-5p

• Accession: MIMAT0059267
• Description: Triops cancriformis tcf-miR-10325-5p mature miRNA
• Sequence: 1 - UAUCUAGCAAUCCUGAUGAUGUCGC - 25
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10325-3p

• Accession: MIMAT0041465
• Description: Triops cancriformis tcf-miR-10325-3p mature miRNA
• Sequence: 67 - UAUCAUCGUCUUCUAUGGAUGGCU - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242