Stem-loop tcf-mir-10328

Accession

MI0033300

Description

Triops cancriformis tcf-mir-10328 precursor miRNA

Sequence

681 reads, 39.0 reads per million, 6 experiments

cuUGUUGUUGACGCGACUGCUGUUAGGaagaccuucccaguuguaguucuuccaaacUAGGUCUGUCGCAACGGCGAGCC
((((((((((.(((((((...(((.((((((.((..........)).)))))).)))..)))).).))))))))))))..

Structure

--          A  - -    GCU   A      c  uccc 
  cuUGUUGUUG CG C GACU   GUU GGaaga cu    a
  |||||||||| || | ||||   ||| |||||| ||     
  GAGCGGCAAC GC G CUGG   caa ccuucu ga    g
CC          -  U U    -AU   a      u  uguu 

Annotation confidence Medium

Genome context

Unknown

Mature tcf-miR-10328-5p

• Accession: MIMAT0059268
• Description: Triops cancriformis tcf-miR-10328-5p mature miRNA
• Sequence: 3 - UGUUGUUGACGCGACUGCUGUUAGG - 27
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10328-3p

• Accession: MIMAT0041468
• Description: Triops cancriformis tcf-miR-10328-3p mature miRNA
• Sequence: 58 - UAGGUCUGUCGCAACGGCGAGCC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242