miRBase entry: tcf-mir-10331

Stem-loop tcf-mir-10331


Accession
MI0033303
Description
Triops cancriformis tcf-mir-10331 precursor miRNA


Sequence

361 reads, 20.0 reads per million, 6 experiments
CCCCGUGGAAGUCUGGAUAUUUUAuauaaaaaaUUCCAGGCUCUUCGGGAU
.((((.(((.(((((((.(((((......))))))))))))))).))))..

Structure
-C    U   A       U     Au 
  CCCG GGA GUCUGGA AUUUU  a
  |||| ||| ||||||| |||||   
  GGGC UCU CGGACCU Uaaaa  u
UA    U   -       -     aa 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcf-miR-10331-5p

Accession MIMAT0041471
Description Triops cancriformis tcf-miR-10331-5p mature miRNA
Sequence 1 - CCCCGUGGAAGUCUGGAUAUUUUA - 24
Evidence experimental
Illumina [1]

Mature tcf-miR-10331-3p

Accession MIMAT0059270
Description Triops cancriformis tcf-miR-10331-3p mature miRNA
Sequence 34 - UUCCAGGCUCUUCGGGAU - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25525151
    Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
    "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
    "RNA (2015) 21:230-242