Stem-loop tcf-mir-10333

Accession

MI0033305

Description

Triops cancriformis tcf-mir-10333 precursor miRNA

Sequence

254 reads, 14.0 reads per million, 6 experiments

aUCGGACAAGUAGUUUUUAcgaaaucaugacuagaguuuccaaauacuaguaaaugguuucgUAAAAACCACAUGUCCGAUUUG
((((((((.((.((((((((((((((((.(((((.(((....))).)))))..)))))))))))))))).)).))))))))...

Structure

---        A  A                -g     a   u 
   aUCGGACA GU GUUUUUAcgaaaucau  acuag guu c
   |||||||| || ||||||||||||||||  ||||| |||  
   UAGCCUGU CA CAAAAAUgcuuuggua  ugauc uaa c
GUU        A  C                aa     a   a 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10333-5p

• Accession: MIMAT0059272
• Description: Triops cancriformis tcf-miR-10333-5p mature miRNA
• Sequence: 2 - UCGGACAAGUAGUUUUUA - 19
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10333-3p

• Accession: MIMAT0041473
• Description: Triops cancriformis tcf-miR-10333-3p mature miRNA
• Sequence: 63 - UAAAAACCACAUGUCCGAUUUG - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242