Stem-loop tcf-mir-10336

Accession

MI0033308

Description

Triops cancriformis tcf-mir-10336 precursor miRNA

Sequence

489 reads, 24.0 reads per million, 6 experiments

AACCAGGCUGAGGUCUUGACGAGAAuuucaaugagauuCUUGUACUUUGGCCUGGAAACAAAU
..((((((((((((....(((((((((((...)))))))))))))))))))))))........

Structure

------AA            CUUG           a 
        CCAGGCUGAGGU    ACGAGAAuuuc  
        ||||||||||||    ||||||||||| a
        GGUCCGGUUUCA    UGUUCuuagag  
UAAACAAA            ----           u 

Annotation confidence Medium

Genome context

Unknown

Mature tcf-miR-10336-5p

• Accession: MIMAT0041476
• Description: Triops cancriformis tcf-miR-10336-5p mature miRNA
• Sequence: 1 - AACCAGGCUGAGGUCUUGACGAGAA - 25
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10336-3p

• Accession: MIMAT0059274
• Description: Triops cancriformis tcf-miR-10336-3p mature miRNA
• Sequence: 39 - CUUGUACUUUGGCCUGGAAACAAAU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242