Stem-loop tcf-mir-10337

Accession

MI0033309

Description

Triops cancriformis tcf-mir-10337 precursor miRNA

Sequence

175 reads, 10.0 reads per million, 6 experiments

UGUUUCGCUUGUUGUGCGGCGuucuccauagcucgagcuuugucUAGGAUCGUUUCAAGUGACACGUC
.((.(((((((....(((..(((((.((.(((....))).))...))))))))..))))))).))...

Structure

--U  U       UUGU   GC     --c  u   u 
   GU UCGCUUG    GCG  Guucu   ca agc c
   || |||||||    |||  |||||   || |||  
   CA AGUGAAC    UGC  UAGGA   gu ucg g
CUG  C       --UU   --     Ucu  u   a 

Annotation confidence Low

Genome context

Unknown

Mature tcf-miR-10337-5p

• Accession: MIMAT0059275
• Description: Triops cancriformis tcf-miR-10337-5p mature miRNA
• Sequence: 1 - UGUUUCGCUUGUUGUGCGGCG - 21
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10337-3p

• Accession: MIMAT0041477
• Description: Triops cancriformis tcf-miR-10337-3p mature miRNA
• Sequence: 45 - UAGGAUCGUUUCAAGUGACACGUC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242