Stem-loop tcf-mir-10339

Accession

MI0033311

Description

Triops cancriformis tcf-mir-10339 precursor miRNA

Sequence

188 reads, 10.0 reads per million, 6 experiments

UAGGGGAUAGUGCAGAGGUCUAuuuauucacUAGACCUCUGCACUAUCCCCUgua
((((((((((((((((((((((.........))))))))))))))))))))))..

Structure

--                      uuu 
  UAGGGGAUAGUGCAGAGGUCUA   a
  ||||||||||||||||||||||   u
  gUCCCCUAUCACGUCUCCAGAU   u
au                      cac 

Annotation confidence Medium

Genome context

Unknown

Mature tcf-miR-10339-5p

• Accession: MIMAT0041479
• Description: Triops cancriformis tcf-miR-10339-5p mature miRNA
• Sequence: 1 - UAGGGGAUAGUGCAGAGGUCUA - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10339-3p

• Accession: MIMAT0059276
• Description: Triops cancriformis tcf-miR-10339-3p mature miRNA
• Sequence: 32 - UAGACCUCUGCACUAUCCCCU - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242