Stem-loop tcf-mir-10316b

Accession

MI0033313

Description

Triops cancriformis tcf-mir-10316b precursor miRNA

Sequence

471 reads, 27.0 reads per million, 6 experiments

ACUGAGAACGGUUCGAGUCGACUcauaagguuacguggagucgagucgagucacuaugguuaaagcgAGUCGAGUCGAACCGUUCUCAGAcc
.(((((((((((((((.(((((((.........((((((.(((...))).)).).)))........))))))).)))))))))))))))...

Structure

--A               G       auaagguua   - -  g   a 
   CUGAGAACGGUUCGA UCGACUc         cgu g ga ucg  
   ||||||||||||||| |||||||         ||| | || ||| g
   GACUCUUGCCAAGCU AGCUGAg         gua c cu agc  
ccA               G       -cgaaauug   u a  g   u 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10316b-5p

• Accession: MIMAT0041481
• Description: Triops cancriformis tcf-miR-10316b-5p mature miRNA
• Sequence: 1 - ACUGAGAACGGUUCGAGUCGACU - 23
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10316b-3p

• Accession: MIMAT0059277
• Description: Triops cancriformis tcf-miR-10316b-3p mature miRNA
• Sequence: 68 - AGUCGAGUCGAACCGUUCUCAGA - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242