Stem-loop tcf-mir-10349

Accession

MI0033326

Description

Triops cancriformis tcf-mir-10349 precursor miRNA

Sequence

927 reads, 53.0 reads per million, 6 experiments

UGAGCACCAAUAAGCACACGGACUccagauuucgcauuguagcgcuuGCCGUGGCUUCGUUGGGACCAUCC
((.(..(((((((((.(((((.(...((....(((......))))).)))))))))).)))))..)))...

Structure

---  A CA     -    A     A Ucc  auuu   au 
   UG G  CCAAU AAGC CACGG C   ag    cgc  u
   || |  ||||| |||| ||||| |   ||    |||   
   AC C  GGUUG UUCG GUGCC G   uc    gcg  g
CCU  - AG     C    -     - --u  ----   au 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10349-5p

• Accession: MIMAT0041491
• Description: Triops cancriformis tcf-miR-10349-5p mature miRNA
• Sequence: 1 - UGAGCACCAAUAAGCACACGGACU - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10349-3p

• Accession: MIMAT0059281
• Description: Triops cancriformis tcf-miR-10349-3p mature miRNA
• Sequence: 48 - GCCGUGGCUUCGUUGGGACCAUCC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242