Stem-loop tcf-mir-10352

Accession

MI0033329

Description

Triops cancriformis tcf-mir-10352 precursor miRNA

Sequence

43 reads, 3.0 reads per million, 5 experiments

ccggggaagagggaaagguggcccuguucaaguaagcagcaaauguucgcuuacgcgggCUUCUUAUCCGUCUGUCCCGGU
((((((.(((.(((.(((.(((((.((....(((((((((....))).))))))))))))).))).))).))).)))))).

Structure

-      a   g   a   u     u  ucaa      -   a 
 ccgggg aga gga agg ggccc gu    guaagc agc a
 |||||| ||| ||| ||| ||||| ||    |||||| |||  
 GGCCCU UCU CCU UUC UCggg cg    cauucg uug a
U      G   G   A   U     -  ----      c   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcf-miR-10352-3p

• Accession: MIMAT0041494
• Description: Triops cancriformis tcf-miR-10352-3p mature miRNA
• Sequence: 60 - CUUCUUAUCCGUCUGUCCCGGU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242