Stem-loop tcf-mir-10354

Accession

MI0033332

Description

Triops cancriformis tcf-mir-10354 precursor miRNA

Sequence

502 reads, 29.0 reads per million, 6 experiments

UGCAAUGGGUCGCACUGAGACUgaggcaugccucccucagUGUUCGAGCUUUUGUCUU
.((((.((.((((((((((...((((....)))).)))))))..))).)).))))...

Structure

--U    U  G   --       ACU    c 
   GCAA GG UCG  CACUGAG   gagg a
   |||| || |||  |||||||   ||||  
   UGUU UC AGC  GUgacuc   cucc u
UUC    U  G   UU       --c    g 

Annotation confidence High

Genome context

Unknown

Mature tcf-miR-10354-5p

• Accession: MIMAT0041497
• Description: Triops cancriformis tcf-miR-10354-5p mature miRNA
• Sequence: 1 - UGCAAUGGGUCGCACUGAGACU - 22
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-10354-3p

• Accession: MIMAT0059284
• Description: Triops cancriformis tcf-miR-10354-3p mature miRNA
• Sequence: 41 - UGUUCGAGCUUUUGUCUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242