miRBase entry: tcf-mir-87b

Stem-loop tcf-mir-87b


Accession
MI0033333
Description
Triops cancriformis tcf-mir-87b precursor miRNA


Sequence

17565 reads, 809.0 reads per million, 6 experiments
AGCCUGAUAUCUUGCUCGACCUuauguauggcgGUGAGCAAAUCAUCAGGUGCGU
.(((((((...((((((.(((...........)))))))))...)))))))....

Structure
---A       AUC      G   Uuau 
    GCCUGAU   UUGCUC ACC    g
    |||||||   |||||| |||    u
    UGGACUA   AACGAG UGg    a
UGCG       CUA      -   cggu 


Annotation confidence High
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcf-miR-87b-5p

Accession MIMAT0059285
Description Triops cancriformis tcf-miR-87b-5p mature miRNA
Sequence 1 - AGCCUGAUAUCUUGCUCGACCU - 22
Evidence experimental
Illumina [1]

Mature tcf-miR-87b-3p

Accession MIMAT0041498
Description Triops cancriformis tcf-miR-87b-3p mature miRNA
Sequence 34 - GUGAGCAAAUCAUCAGGUGCGU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25525151
    Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
    "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
    "RNA (2015) 21:230-242