Stem-loop ssc-mir-10384-1

Accession

MI0033394

Description

Sus scrofa ssc-mir-10384-1 precursor miRNA

Sequence

40387 reads, 23.0 reads per million, 189 experiments

gcCCCUGCGUGGCUUCUCUGUGCAgucuuuucuucugggaccugCACAGGAAGGCCACGGAGGGGC
((((((.((((((((.(((((((((((((.......)))).))))))))).)))))))).))))))

Structure

      G        C         -    uu 
gcCCCU CGUGGCUU UCUGUGCAg ucuu  c
|||||| |||||||| ||||||||| ||||  u
CGGGGA GCACCGGA GGACACguc aggg  u
      G        A         c    uc 

Annotation confidence High

Genome context

chr2: 88902990-88903055 [+]

Mature ssc-miR-10384-5p

• Accession: MIMAT0041592
• Description: Sus scrofa ssc-miR-10384-5p mature miRNA
• Sequence: 3 - CCCUGCGUGGCUUCUCUGUGCA - 24
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-10384-3p

• Accession: MIMAT0052715
• Description: Sus scrofa ssc-miR-10384-3p mature miRNA
• Sequence: 45 - CACAGGAAGGCCACGGAGGGGC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252