Stem-loop ssc-mir-26b

Accession

MI0033397

Description

Sus scrofa ssc-mir-26b precursor miRNA

Literature search

12 open access papers mention ssc-mir-26b
(19 sentences)

Sequence

645 reads, 261 reads per million, 11 experiments

cccagUUCAAGUAAUUCAGGAUAGGUUgugugcuguccagCCUGUUCUCCAUUACUUGGCUcggg
((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))

Structure

   -   U        UC           u ug 
ccc agU CAAGUAAU  AGGAUAGGUUg g  c
||| ||| ||||||||  ||||||||||| |   
ggg UCG GUUCAUUA  UCUUGUCCgac c  u
   c   -        CC           - ug 

Annotation confidence Not enough data

Genome context

chrUScaf756: 56015-56079 [+]

Mature ssc-miR-26b-5p

• Accession: MIMAT0041595
• Description: Sus scrofa ssc-miR-26b-5p mature miRNA
• Sequence: 6 - UUCAAGUAAUUCAGGAUAGGUU - 27
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-26b-3p

• Accession: MIMAT0041596
• Description: Sus scrofa ssc-miR-26b-3p mature miRNA
• Sequence: 41 - CCUGUUCUCCAUUACUUGGCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252