Stem-loop ssc-mir-670

Accession

MI0033398

Description

Sus scrofa ssc-mir-670 precursor miRNA

Sequence

9 reads, 6 reads per million, 6 experiments

cugacaucccugaguguauguggugaaccugaauuugccuugggUUUCCUCAUAUUCAUUCAGGAGUGucag
(((((((.((((((((.((((((.((((((((.......)))))))).).))))).)))))))).)))))))

Structure

       c        u     - u        au 
cugacau ccugagug augug g gaaccuga  u
||||||| |||||||| ||||| | ||||||||  u
gacuGUG GGACUUAC UAUAC C UUUggguu  g
       A        U     U C        cc 

Annotation confidence Not enough data

Genome context

chr2: 20399938-20400009 [-]

Mature ssc-miR-670

• Accession: MIMAT0041597
• Description: Sus scrofa ssc-miR-670 mature miRNA
• Sequence: 45 - UUUCCUCAUAUUCAUUCAGGAGUG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252