Stem-loop ssc-mir-141

Accession

MI0033406

Description

Sus scrofa ssc-mir-141 precursor miRNA

Literature search

12 open access papers mention ssc-mir-141
(15 sentences)

Sequence

606574 reads, 555.0 reads per million, 172 experiments

cCAUCUUCCAGCACAGUGUUGGAuggucuaauagugaagcuccUAACACUGUCUGGUAAAGAUGg
(((((((((((.(((((((((((...((.......))...))).))))))))))))..)))))))

Structure

       --    C        -   ugg  ua 
cCAUCUU  CCAG ACAGUGUU GGA   uc  a
|||||||  |||| |||||||| |||   ||  u
gGUAGAA  GGUC UGUCACAA ccu   ag  a
       AU    -        U   cga  ug 

Annotation confidence High

Genome context

chr5: 66193719-66193783 [-]

Mature ssc-miR-141-5p

• Accession: MIMAT0052724
• Description: Sus scrofa ssc-miR-141-5p mature miRNA
• Sequence: 2 - CAUCUUCCAGCACAGUGUUGGA - 23
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-141-3p

• Accession: MIMAT0041605
• Description: Sus scrofa ssc-miR-141-3p mature miRNA
• Sequence: 44 - UAACACUGUCUGGUAAAGAUG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25230983
   The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
   "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
   "J Appl Genet (2015) 56:239-252