miRBase entry: ssc-mir-6516

Stem-loop ssc-mir-6516


Accession
MI0033411
Description
Sus scrofa ssc-mir-6516 precursor miRNA


Sequence

21 reads, 34 reads per million, 8 experiments
guuuugaauuugcaguaacaggugugaacauucuagcagcaguuugaugAUCAUGUAUGAUACUGCAAACAaaac
((((((..(((((((((.((..(((((.((((..(((....))).)))).)))))..)).)))))))))))))))

Structure
      aa         a  gg     a    cu   a 
guuuug  uuugcagua ca  uguga cauu  agc g
||||||  ||||||||| ||  ||||| ||||  |||  
caaaAC  AAACGUCAU GU  GUACU guag  uug c
      --         A  AU     A    -u   a 


Annotation confidence Not enough data
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Genome context
chr12: 4273963-4274037 [+]

Database links

Mature ssc-miR-6516

Accession MIMAT0041610
Description Sus scrofa ssc-miR-6516 mature miRNA
Sequence 50 - AUCAUGUAUGAUACUGCAAACA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25230983
    The characteristics of the porcine (Sus scrofa) liver miRNAome with the use of next generation sequencing
    "Pawlina K, Gurgul A, Oczkowicz M, Bugno-Poniewierska M"
    "J Appl Genet (2015) 56:239-252