miRBase entry: hsa-mir-10394

Stem-loop hsa-mir-10394


Accession
MI0033418
Description
Homo sapiens hsa-mir-10394 precursor miRNA


Sequence

19 reads, 31 reads per million, 12 experiments
UCUGCAGGUCCUGGUGAACGCCAUcaucaacagugguccccgggaggacuccacacgcauUGGGCGCGCCGGGACUGUGAGAC
(((...((((((((((..((((..((......((((...((....))...))))......))))))))))))))))...))).

Structure
-   GCA          AA    AU  ucaaca    ucc  g 
 UCU   GGUCCUGGUG  CGCC  ca      gugg   cc g
 |||   ||||||||||  ||||  ||      ||||   ||  
 AGA   UCAGGGCCGC  GCGG  GU      cacc   gg g
C   GUG          --    --  uacgca    uca  a 


Annotation confidence Not enough data
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Genome context
chr19: 58393364-58393446 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-10394
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-10394-5p

Accession MIMAT0041619
Description Homo sapiens hsa-miR-10394-5p mature miRNA
Sequence 1 - UCUGCAGGUCCUGGUGAACGCCAU - 24
Evidence experimental
Illumina [1]

Mature hsa-miR-10394-3p

Accession MIMAT0041620
Description Homo sapiens hsa-miR-10394-3p mature miRNA
Sequence 61 - UGGGCGCGCCGGGACUGUGAGAC - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25723320
    Comprehensive miRNA sequence analysis reveals survival differences in diffuse large B-cell lymphoma patients
    "Lim EL, Trinh DL, Scott DW, Chu A, Krzywinski M, Zhao Y, Robertson AG, Mungall AJ, Schein J, Boyle M, Mottok A, Ennishi D, Johnson NA, Steidl C, Connors JM, Morin RD, Gascoyne RD, Marra MA"
    "Genome Biol (2015) 16:18